About the origin of Born rule

Lubos has been again aggressive. At this time Sean Carroll became the victim of Lubos's verbal attacks. The reason why Lubos got angry was the articles of Carroll and his student to derive Born rule from something deeper: this deeper was proposed to be many worlds fairy tale as Lubos expresses it. I agree with Lubos about the impossibility to derive Born rule in the context of wave mechanics - here emphasis is on "wave mechanics". I also share the view about many worlds interpretation - at least I have not been able to make any sense of it mathematically.

Lubos does not miss the opportunity to personally insult people who tell about their scientific work on blogs. Lubos does not realize that this is really the only communication channel for many scientists. For the out-laws of the academic world blogs, home pages, some archives, and some journals (of course not read the "real" researchers enjoying monthly salary) provide the only manner to communicate their work. Super string hegemony did good job in eliminating people who did not play the only game in the town: also I had the opportunity to learn this.

Ironically, also Lubos is out-of-law, probably due to his overly aggressive blog behaviors in past. Perhaps Lubos does not see this as a personal problem since - according to his own words - he has decided to not publish anything without financial compensation because this would make him communist.

Concerning Born rule I dare to have a different opinion than Lubos. I need not be afraid of Lubos's insults since Lubos as a brahmine of science refuses to comment anything written by inferior human beings like me and even refuses to mention their names: maybe Lubos is afraid of doing it might somehow infect him with the thoughts of casteless.

Without going to the details of quantum measurement theory, one can say that Born's rule is bilinear exression for the initial and final states of quantum mechanical transition amplitude. Bilinearity is certainly something deep and I will go to that below. Certainly Born's rule gives the most natural expression for the transition amplitude: demonstraing this is of course not a derivation for it.

1. One could invent for the transition amplitude formal expressions non-linear in normalized initial and final states. One can however argue that the acceptable expressions must be symmetric in initial and final states.
   
   
2. The condition that the transition amplitude conserves quantum numbers associated with symmetries suggests strongly that the transition amplitude is a function of the bilinear transition amplitude between initial and final states and norms of initial and final states. The standard form for non-normalized states - inner product divided by product of square roots norms - is indeed of this form. For instance, one could add exponentials of the norms of initial and final state norms.
   
   
3. Projective invariance of the transition amplitude - the independence of the transition probabilities from normalization- implies that standard transition amplitude multiplied by a function - say exponential - of the modules square of the standard amplitude (transition probability in standard approach) remains to be considered.
   
   
4. One could however still consider the possibility that the probability as given by Born rule are replaced by its function: p_ij→ f(p_ij)p_ij. Unitary poses strong constraints on f and my guess that f =1 is the only possibility.
   
   

Sidestep: To make this more concrete, the proponents of so called weak measurement theory propose a modification of formulate for the matrix element of an operator A to ⟨i|A|f⟩/⟨i|f⟩. The usual expression contains the product of square roots of the norms instead of ⟨i|f⟩. This is complete nonsense since for orthogonal states the expression can give infinity and for A =I, unit matrix, it gives same matrix element between any two states. For some mysterious reason the notion weak measurement - to be sharply distinguished from interaction free measurement - has ended up to Wikipedia and popular journals comment it enthusiastically as a new revolution in quantum theory.

Consider now the situation in TGD framework.

1. In TGD framework the configuration space, "World of Classical Worlds" consisting of pairs of 3-surfaces at opposite boundaries of causal diamonds (CDs), is infinite-dimensional, and this sharply distinguishes TGD based quantum theory from wave mechanics. More technically, hyperfinite factors of type II (and possibly also III) replace factors of type I, in the mathematical formulation of the theory.
   

   Finite measurement resolution is unavoidable and is represented elegantly in terms of inclusions of hyper-finite factors. This means that single ray of state space is replaced with infinite-D sub-space whose states cannot be distinguished from each other in given measurement resolution. The infinite-dimensional character of WCW makes the definition of the inner product for WCW spinor fields extremely delicate.
   

   Note that WCW spinor fields are formally classical at WCW level and state function reduction remains the only genuinely quantal aspect of TGD. At space-time level one must perform second quantization of induced spinor fields to build WCW gamma matrices in terms of fermionic oscillator operators.
   
   

2. WCW spinors which are fermionic Fock states associated with a given 3-surface. There are good reasons to believe that the generalization of the usual bilinear inner product defined by integration of the spinor bilinear over space (with Euclidian signature) generalizes but under extremely restrictive condition. Spinor bilinear is replaced with fermionic Fock space inner product and this bilinear is integrated over WCW.
   

   The integration over WCW makes sense only if WCW allows a metric which is invariant under maximal group of isometries- this fixes WCW and physics highly uniquely. To avoid divergences one must also assume that Ricci scalar vanishes and empty space Einstein equations hold true. Metric determinant is ill-defined and must be cancelled by the Gaussian determinant coming from the exponent of vacuum functional, which is exponent of Kähler action if WCW metric is Kähler as required by the geometrization of hermitian conjugation which is basic operation in quantum theory. One could however still consider the possibility that the probabilities given by Born rule are replaced by their functions: p_ij→ f(p_ij)p_ij but unitarity excludes this. Infinite-dimensionality is thus quite not enough: something more is needed unless one assumes unitarity.
   
   

3. Zero Energy Ontology brings in the needed further input. In ZEO the transition amplitudes correspond to time-like entanglement coefficients of positive and negative energy parts of zero energy states located at the opposite light-like boundaries of causal diamond. The deep principle is that zero energy states code for the laws of physics as expressed byS-matrix and its generalizations in ZEO
   

   This implies that transition amplitudes is automatically bilinear with respect to positive and negative energy parts of zero energy state, which correspond to initial and final states in positive energy ontology. The question why just Born rule disappears in ZEO.
   

That ZEO gives justification also for Born rule is nice since it has produced a solution also to many other fundamental problems of quantum theory. Consider only the basic problem of quantum measurement theory due to determinism of Schrödinger equation contra non-determinism of state function reduction: Bohr's solution was to give up entirely ontology and take QM as a mere toolbox of calculational rules.

There is also the problem the relationship between geometric time and experienced time, which ZEO allows to solve and leads to much more detailed view about what happens in state function reduction. The most profound consequences are at the level of consciousness theory which is essentially generalization of ordinary quantum measurement theory in order to make observer part of the system by introducing the notion of self. ZEO also makes the physical theories testable: any quantum state can be achieved from vacuum in ZEO whereas in standard positive energy ontology conservation laws make this impossible so that at the level of principle the testing of the theory becomes impossible without additional assumptions.

Has the decay of dark photons to visible photons been observed in cosmological scales?

There is an interesting news providing new light to the puzzles of dark matter in New Scientist. It has been found that Universe is too bright. There are too many high energy UV photons in the spectrum. The model calculations suggest also that this too high brightness has emerged lately, and was not present in the early universe. The intergalactic space contains more neutral hydrogen and thus also more ionized hydrogen as thought previously and it was hoped that the ionized hydrogen could explain the too high brightness. It is now however clear that 5 times more ionized hydrogen would be required than theory allows accepting the experimental data.

The question is whether dark matter could explain the anomaly.

1. The usual dark matter candidates have by definition extremely weak interactions - not only with ordinary matter and also with dark matter. Therefore it is not easy to explain the finding in terms of ordinary dark matter. The idea about dark matter as remnant from the early cosmology does not fit naturally with the finding that the surplus UV radiation does not seem to be present in the early Universe.
   
   
2. In TGD dark matter is ordinary matter with large h_eff=n× h and has just the ordinary interactions with itself but no direct interactions with visible matter. Thus these interactions produce dark radiation with visible and UV energies but with probably much lower frequencies (from E= h_efff). The energy preserving transformations of dark photons to ordinary ones are an obvious candidate for explaining the surprlus UV light.
   
   
3. These transitions are fundamental in TGD inspired model of quantum biology. Biophotons are in visible and UV range and identified as decay products of dark photons in living matter. The fact that the surplus has appeared recently would conform with the idea that higher levels of dark matter hierarchy have also appeared lately. Could the appearance of UV photons relate to the generation of dark matter responsible for the evolution of life? And could the surplus ionization of hydrogen also relate to this? Ionization is indeed one of the basic characteristics of living matter and makes possible charge separation (see this), which is also a crucial element of TGD inspired quantum biology (see this).
   
   

Do electrons serve as nutrients?

The New Scientist article about bacteria using electrons as nutrients is very interesting reading since the reported phenomenon might serve as a test for the TGD inspired idea about metabolism as a transfer of negentropic entanglement (NE) at fundamental level (see this and this).

1. NE is always between two systems: nutrient and something, call it X. The proposal inspired by a numerical co-incidence was that X could be what I have called Mother Gaia. X could be also something else, say personal magnetic body. The starting point was the claim that the anomalously high mass of electronic Cooper pair in rotating supercounductor (slightly larger than the sum of electron masses!) could be due to a gravimagnetic effects which is however too strong by a factor 10²⁸. This claim was made by a respected group of scientists. Since the effect is proportional to the gravimagnetic Thomson field proportional to the square of Planck constant, the obvious TGD inspired explanation would be h_eff≈ 10¹⁴ (see this and this).
   
   
2. Gravitational Planck constant h_gr= GMm/v₀, v₀ a typical velocity in system consisting of masses M>>m and m was introduced originally by Nottale. I proposed that it is genuine Planck constant assignable to flux tubes mediating gravitational interaction between M and m. In the recent case v₀ could be the rotating velocity of Earth around its axis at the surface of Earth.
   
   
3. For electron, ions, molecules, .. the value of h_gr would of the order of 10¹⁴ required by the gravimagnetic anomaly and is also of the same order as h_eff=n× h needed by the hypothesis that cyclotron energies for these particles are universal (no mass dependence) and in the visible and UV range assigned to biophotons. Biophotons would result from dark photons via phase transition. This leads to the hypothesis h_eff=h_gr unifying the two proposals for the hierarchy of Planck constants at least in microscopic scales.
   
   

   
   Thanks to Equivalence Principle implying that gravitational Compton length does not depend on particle's mass, Nottale's findings can be understood if h_gr hypothesis holds true only in microscopic scales. This would mean that gravitation in planetary system is mediated by flux tubes attached to particles rather than entire planet, say. One non-trivial implication is that graviton radiation is dark so that single graviton carries much larger energy than in GRT based theory. The decay of dark gravitons to ordinary gravitons would produce bunches of ordinary gravitons rather than continuous stream: maybe this could serve as an experimental signature. Gravitational radiation from pulsars is just at the verge of detection if it is what GRT predicts. TGD would predict pulsed character and this might prevent its identification if based on GRT based belief system.
   
   

4. In the recent case the model would say that the electrons serving as nutrients have this kind of negentropic entanglement with Mother Gaia. h_gr=h_eff would be of order 10⁸. Also in nutrients electrons would be the negentropically entangled entities. If the model is correct, nutrient electrons would be dark and could also form Cooper pairs. This might serve as the eventual test.

Electrons are certainly fundamental for living matter in TGD Universe.

1. Cell membrane is assumed to be high T_c electronic superconductor (see this). Members of Cooper pairs are at flux tubes carrying opposite magnetic fields so that the magnetic interaction energy produces very large binding energy for the large values of h_eff involved: of the order of electron volts! This is also the TGD based general mechanism of high T_c superconductivity: it is now accepted that anti ferromagnetism is crucial and flux tubes carrying fluxes at opposite directions is indeed very antiferromagnetic kind of thing.
   
   
2. Josephson energy is proportional to membrane voltage (E_J= 2eV) is just above the thermal energy at room temperature meaning minimal metabolic costs.
   
   
3. Electron's secondary p-adic time scale is .1 seconds, the fundamental biorhythm which corresponds to 10 Hz alpha resonance.
   
   

What self is?

The concept of self seems to be absolutely essential for the understanding of the macroscopic and macro-temporal aspects of consciousness and would be counterpart for observer in quantum measurement theory.

The original proposal was that self is conscious entity.

1. Self corresponds to a subsystem able to remain un-entangled under the sequential informational 'time evolutions' U. Exactly vanishing entanglement is practically impossible in ordinary quantum mechanics and it might be that 'vanishing entanglement' in the condition for self-property should be replaced with 'subcritical entanglement'. If space-time decomposes into p-adic and real regions, and if entanglement between regions representing physics in different number fields vanishes, space-time indeed decomposes into selves in a natural manner. Causal diamonds would form natural imbedding space correlates for selves and their hierarchy would correspond to self hierarchy.
   
   
2. The intuitive idea inspired by the formation of bound states of particles from particles was that self corresponds somehow to an integration of quantum jumps to single coherent whole. Later I gave up this idea since it was difficult to understand how the integration could take place.
   
   
3. The next suggestion was that quantum jumps as such correspond to selves. It was however difficult to assign to selves identified in this manner a definite geometric time duration. It is an empirical fact that this kind duration can be assigned to mental images (identified as subselves).
   
   
4. One could also introduce self as a subsystem which is only potentially consciousness and here the notion of negentropic entanglement suggests an obvious approach based on interaction free measurement. Negentropy Maximization Principle (NMP) implies that Universe is like a library with new books emerging continually at its shelves. This would explain evolution. One can however argue that negentropic entanglement - "Akashic records" - gives rise only to self model rather than self.
   
   
5. The approach which seems the most convincing relies on the observation that ZEO sequences of ordinary state function reductions leaving state unchanged are replaced with sequences for which the part of the zero energy state associated with a fixed boundary of CD state remains unchanged in state function reduction whereas the state at the other end of CD changes. This is something new and explains the arrow of time and its flow and self could be understood as a sequence of quantum jumps at fixed boundary of CD (with the average location of second boundary shifted towards geometric future like in dispersion). Amusingly, this is in accordance with the original proposal except that state function reductions
   take place on same boundary of CD.
   

   This view is extremely attractive since it implies that the act of free will interpreted as genuine state function reduction must mean reversal for the direction of geometric time at some level of hierarchy of selves. The proposal has indeed been that sensory perception and motor action are time reversals of each other and that motor action involves sending of negative energy signals to the geometric past.
   
   

For details and background see the chapter "Self and binding" of "TGD inspired theory of consciousness".

Post-empirical science or an expansion of scope: which would you choose?

Bee has very interesting comments about the thoughts of Richard Dawid about what assessment of physical theory is. Dawid sees that we are making a transition to post-empirism in which other than empirical facts serve increasingly as the criteria for deciding whether physical theory is useful.

Post-empirical science does is not an attractive vision about the future of science. For instance, the standard claim during string theory hegemony has been that string theories are totally exceptional and that the usual criteria do not apply to them. Bee comments also the notion of "usefulness" having also the sociological aspects in the cruel academic world in which we have to live.

People participating in the discussion seem to agree that theory assessment has become increasingly difficult. Philosopher Richard Dawid suggests what I would call giving up.

Why theory assessment has become so difficult? Is this really true? Or could it be that some wrong belief in our scientific belief system has caused this?

Could it be that our idea about what unified physical theory should be able to describe is badly wrong. When we speak about unification, we take the naive length scale reductionism as granted. We want to believe that everything physical above weak boson length scale is understood and the next challenge is to jump directly to Planck scale (itself a notion based on naive dimensional analysis and could lead to a totally wrong track concerning the ultimate nature of gravitation!).

In practice this means that we we drop from the field of attention entire fields of natural sciences such as biology and neuroscience - to say nothing about consciousness (conveniently reduced to physics in materialistic dogma). These fields provide a rich repertoire of what might could be seen as anomalies of existing physical theory provided we give up the dogma of length scale reductionism and see these anomalies as what they really are: phenomena about whose physical description or correlates of we actually don't heave a slightest clue. Admitting that we do not actually understand could be the way out of blind alley.

This kind of expansion of the view about what theory should explain might be extremely useful and open up new words for theoretician to understand. Theory could not anymore be degenerated to a question what happens in Planck length scale and it would have huge number of observations to explain. What are the basic new principles needed? This would become the basic question. One candidate for them is obviously fractality possibly replacing the naive length scale reductionism. This would bring in also philosophy, but in good sense rather than as an attempt to authorize a theory which has turned out incapable of saying anything interesting about the observed world.

Does DNA understand speech or should you sing to it?

There is an interesting popular web article about the work of Peter Gariaev with whom I have written a couple of articles. One of the findings of Gariaev's group is that the intronic portion of the DNA has a statistical resemblance to the structure of language (words of language correspond to DNA codons and Zipf's law appears to be obeyed). The question whether introns could code language at molecular level comes to mind.

It is also reported that the connection with language is much more concrete. The words of spoken language generate response at the level of DNA: DNA "hears" and maybe understands language (or is it us who understand the language in this manner?). If one accepts that even water has memory and reacts to signals inducing emotions in living organisms, this would not be so surprising. In fact, in TGD framework water would be primitive life form with dark DNA consisting of protonic strings such that proton states would be in 1-1 correspondence with DNAs, RNAs, amino-acids and perhaps even tRNAs (see this). Vertebrate genetic code follows from natural assumptions between dark counterparts of DNAs and amino-acids.

So the claim is that spoken language modulating em radiation has effect on DNA. In standard physics context it is difficult to see how this could make sense. The energies of phonons at audible frequencies are simply so low that understanding the effect in terms of phonons does not seem to be possible. Could it make sense in TGD inspired quantum biology? One can at least try and this is what is done in the sequel. The explanation relies on the basic assumptions of TGD inspired quantum biology distilled during last 10 years.

1. Dark matter corresponds to a hierarchy of phases labelled by the values of effective Planck constant given by h_eff= n×h (see this). This hypothesis can be reduced to the failure of strict determinism for the basic variational principle of TGD and is consistent with the the notion of gravitational Planck constant defined as h_gr= GMm/v₀, where v₀ is characteristic velocity assignable to the two particle system consisting of masses m and M (see this). This formula holds true at flux tubes mediating gravitational interaction in terms of gravitonic "massless extremals" (MEs) topologically condensed at them.
   

   For elementary particles,ions, atoms, even biomolecules this formula is consistent with h_eff=h_gr. Equivalence Principle implies that the formula for h_gr must be assumed only for them to explain approximate Bohr orbitology for planetary orbits. For Earth-charged particle system the formula predicts Planck constant for which dark cyclotron photon energies in endogenous magnetic fields are in visible and UV range at which also biophoton energies are. Gravitational Compton length does not depend on the mass of particle - essential for macroscopic quantum coherence and consistent with Equivalence Principle. For Earth-Sun system the gravitational Compton lengths is of the order Earth radius, which suggests that at dark matter level Earth is macroscopic quantum system.
   
   

2. This picture conforms with the hypothesis that biophotons are ordinary photons resulting in h_eff changing phase transition (see this). Since the energy levels of biomolecules belong to visible and UV range, dark photons could control biochemistry by dark-to-bio-photon transitions. This would give the missing interaction link between biochemistry and magnetic body. The standard hypothesis is that biophotons are side products of biochemistry: in TGD Universe biophotons would become active controllers of biochemistry and would be used by magnetic
   body.
   
   
3. Living matter as a random soup of biomolecules is replaced with a highly organized structure. Dark matter can be seen as a library of Akashic records realized in terms of negentropic entanglement (see this). Each dark particle, atom, molecule, etc is at its own magnetic flux tube characterized by h_eff=h_gr. One can say that each book in the Akashic library resides neatly at its own book shelf labelled by the value of magnetic field strength and h_eff. The communication between levels of dark matter hierarchy (book shelves) would take place by using h_eff changing transition of dark photons having a universal energy spectrum independent of the particle mass and depending on the strength of magnetic field at the flux tube. Visible photons correspond to single energy octave which suggests connection with music discussed in the earlier posting (see this).
   
   

In this framework it is not too difficult to understand how DNA could "hear" and maybe even "understand".

1. DNA codons carry -2 units of em charge per single nucleotide due to the presence of one diphosphate in the sugar backbone. The ratio Q_tot/M_tot= 2N(tot)e/M_tot=2e/M(ave) to which cyclotron frequency is proportional, is inversely proportional to the average mass M(ave) of the unit of DNA sequence. Hence DNA sequences are coded by cyclotron frequencies and to "wake up" given unit of DNA it is enough to irradiate it with dark photons at this cyclotron frequency. For long sequences of DNA cyclotron frequency becomes essentially constant if DNAs obey statistical a distribution with single Gaussian peak. One can consider the possibility that the distribution is many-peaked and fractal.
   

   This is not the only one possible option that one can imagine. Cyclotron frequencies could be also assignable - not to DNA itself but - to charged particles at the flux tubes associated with the basic units of DNA.
   
   

2. There are two ways to "wake up" DNA: frequency resonance at the level of dark matter and energy resonance at the level of visible matter. The first manner to wake up DNA is by a transformation of acoustic signal to dark photons at cyclotron frequencies which are also cyclotron frequencies of DNA molecules. DNA units would be analogous to the frequency specific hair cells in cochlea. The TGD inspired model of hearing indeed assumes that the hair cells carry out this transformation. Second manner to wake up DNA is to transform the dark photons first to biophotons with a transition energy of DNA molecule and thus inducing the chemical transition. These dark photons could then excite the DNAs resonantly at cyclotron frequencies or a chemical transition energies after transition to bio-photon. This mechanism breaks quantum coherence.
   

   If the excited DNAs correspond genes or to a portion of DNA inducing gene expression, acoustic signal (say speech) would be transformed to genetic expression and thus generate a physiological response. Introns could also generate em signals transformed to acoustic signals giving eventually rise to internal speech. Here the cyclotron resonance mechanism could be at work. This mechanism respects quantum coherence.
   
   

3. Right brain sings - left brain talks metaphor suggests an interpretation for these two mechanisms. For the singing right brain the cyclotron resonance for dark photons could dominate. For the talking left brain the chemical excitation using biophotons could dominate.
   

Gariaev's experiments suggest that amplitude modulation of light signal by acoustic signal, say speech, is enough.

1. The carrier wave with single frequency modulated by single frequency would consist of a superposition of signals with frequencies which correspond to sum and difference for the frequencies involved. They could naturally correspond to parallel space-time sheets (MEs) (but this is not necessary): the test particle touching both sheets indeed experiences the sum of the effects caused by the two signals. The naive expectation would be that these signals are detected as such. This would not however allow the proposed mechanism.
   

   Another possibility is that the resulting photons at either or both space-time sheets having frequency and energy of (say) visible photons are transformed to dark photons with the frequency of phonon in the frequency range involved with the speech. This condition fixes the value of h_eff to be essentially the ratio of visible and audible carrier frequencies and fixes also the value of the endogenous magnetic field strength from the condition that cyclotron energy scale is same as the energy of visible photon. The MEs in question should be topologically condensed at the magnetic flux tubes.
   
   

2. These dark photons transform to biophotons inducing a response both at the level of biochemistry and at the level of DNA sub-units (talking and singing) : h_eff in question is correct, the DNA sub-unit corresponding to flux tubes with the value of h_eff associated with dark photons is excited and can induce protein translation or some other form of gene expression so that the incoming signal finds expression.
   
   
3. One can consider also acoustic signals transformed directly to dark photon electromagnetic signals propagating along flux tube-massless extremal pairs to DNA since living matter consists of piezo-electrets performing these transformations. These would correspond to communication by "singing": singing could correspond basically frequency modulation induced by the modulation of magnetic field strength ("whale's song"). The variation of membrane voltage by waves and by nerve pulses induce similar frequency modulation.
   
   

For details see the chapter Quantum model for hearing of "TGD and EEG" or the article Pythagoras, music, sacred geometry, and genetic code.

TGD view about homeopathy, water memory, and evolution of immune system

The following gives an attempt to build a brief sketch of TGD based model of water memory and homeopathy as it is after the input from Pollack's findings and h_eff=h_gr=h_em hypothesis.

Summary of the basic facts and overall view

A concice summary of the basic qualitative facts about homeopathy (see this) could be following.

1. The manufacture of the homeopathic remedies consists of repeated dilution and agitation of water sample containing the molecules causing the effect which the remedy is intended to heal. This paradoxical looking healing method is based on "Alike likes alike" rule. This rules brings in mind vaccination causing immune system to develop resistance. The procedure seems to somehow store information about the presence of the molecules and this information induces immune response. Usually it is the organisms or molecules causing the disease which induce immune response.
   
   
2. The ultra-naive and simplistic objection of skeptic is that the repeated dilution involved with the preparation of homeopathic remedy implies that the density of molecules is so small that the molecules can have absolutely no effect. Despite the fact that we live in information society, this is still the standard reaction of a typical skeptic.
   
   
3. A lot of research is done by starting from the natural idea that the electro-magnetic fields associated with the invader molecules (or more complex objects) represent the needed information and that water somehow gets imprinted by these fields. This could for instance mean that water clusters learn to reproduce radiation at frequencies characterizing the invader molecule. Benveniste is one of the most outstanding pioneers in the field. Benveniste et al (see this) even managed to record the VLF frequency finger print of some bio-active molecules and record them in binary form allowing to to yield the same effect as the real bio-active molecule induced. Benveniste was labelled as a fraud. The procedure used by the journal Nature to decide whether Benveniste is swindler or not brings in mind the times of inquisition. It tells a lot about attitudes of skeptics that magician Randi was one member of the jury!
   
   
4. Benveniste's work has been continued and recently HIV Nobelist Montagnier produced what might be regarded as remote replication of DNA using method very similar to that used in manufacturing homeopathic remedy (see this and this).
   
   

The general conclusion is that the em frequencies possibly providing a representation of the molecules are rather low - in VLF region - so that frequencies assignable to molecular transitions are not in question. Cyclotron frequencies assignable to the molecules are the most natural candidates concerning physical interpretation. The corresponding photon energies are extremely low if calculated from E=hf formula of standard quantum mechanics so that quantal effects in the framework of standard quantum theory do not seem to be possible.

My personal interest on water memory was sparked by the work of Cyril Smith about which learned in CASYS 2001 conference years ago. What I learned was what might be called scaling law of homeopathy (see this). Somehow low frequency radiation seems to be transformed to high frequency radiation and the ratio f_h/f_l≈ 2× 10¹¹ seems to be favored frequency ratio.

These two basic findings suggest what looks now a rather obvious approach to homeopathy in TGD framework. The basic physical objects are the magnetic bodies of the invader molecule and water molecule cluster or whatever it is what mimics the invader molecule. The information about magnetic body is represented by dark cyclotron radiation generated by the invader with frequency f_I. This dark radiation is transformed to to ordinary photons with frequency f_h and energy h_efff_l=hf_h, which is above thermal energy, most naturally in the range of bio-photon energies so that the radiation can directly induce transitions of bio-molecules. The analogs for the EZs discovered by Pollack are obvious candidates for "water molecule clusters".

The following summarizes this overall picture in more detail.

Dark photon-bio-photon connection

The idea that bio-photons are decay product of dark photons emerged from the model of EEG (see this) in terms of dark photons with energies above thermal energy. Dark photons in question would be emitted as cyclotron radiation by various particles and molecules, perhaps even macromolecules like DNA sequencies. Also cell membrane would emit dark photons with frequencies, which correspond in good approximation to differences of cyclotron energies for large value of h_eff=nh (see this and this).

1. Bio-photons have spectrum in the visible and UV would decay products of dark cyclotron photons. If the h_eff of particle is proportional to its mass then the cyclotron energy spectrum is universal and does not depend on the mass of the particle at all. The original model of EEG achieved this by assuming that h_eff is proportional to the mass number of the atomic nucleus associated with the ion.
   
   
2. The ideas about dark matter involve two threads: h_eff=n× h thread motivated by biology and the thread based on the notion of gravitational Planck constant and inspired by the observation that planetary orbits seem to obey Bohr rules. h_gr= GMm/v₀ is assigned to the pairs of gravimagnetic flux tubes and massless extremals making possible propagation of dark gravitons. The realization was the two threads can be combined to single thread: by Equivalence Principle h_gr hypothesis is needed only for microscopic objects and in this case h_eff=h_gr makes sense and predicts that dark photon energies and dark particle Compton lengths do not depend on particle and that bio-photon energy spectrum is universal and in the desired range if one assumes that h_gr is associated with particle Earth par with v₀ the rotational velocity at the surface of Earth. Even h_eff=h_em=h_gr hypothesis makes sense. h_em= h_gr is also very natural assumption for ATP synthase which can be regarded as a molecular motor whose rotation velocity appears in the formula for h_em.
   
   
3. The prediction would be that any charged system connected to Earth by flux tubes generates cyclotron dark photons decaying to bio-photons. Bio-photons in turn induce transitions in biomolecules because the energy range is in visible and UV. Magnetic bodies can control biochemistry via resonant coupling with bio-photons.
   
   

Molecular recognition mechanism as basic building brick of primitive immune system

The reconnection of U-shaped magnetic flux tubes emanating from a system makes possible a recognition mechanism involving besides reconnection also resonant interaction via cyclotron radiation which can induced also biochemical transitions of h_eff=h_gr hypothesis holds true.

1. Molecules have U-shaped flux tube loops with fluxes going in opposite directions. This makes possible also super-conductivity with members of Cooper pair at the parallel flux tubes carrying magnetic fluxes in opposite direction since magnetic fields now stabilize Cooper pairs rather than tend to destroy them.
   
   
2. The flux loops associated with systems - call them A and B - can reconnect and this leads to the formation of 2 parallel flux tubes connecting A and B. Stable reconnection suggests that magnetic field strengths must be same at the flux tube pairs associated with A and B. This implies same cyclotron frequencies and resonant interaction. This would define molecular mechanism of recognition and sensing the presence of invader molecules - even conscious directed attention might be involved.
   
   
3. Systems with magnetic body could be constantly varying the thicknesses of at least some of their flux tubes and in order to reconnect with the magnetic body of a possible invader. This activity could be behind the evolution of the immune system.
   

The question is how the system or its sub-system could stabilize itself so that it would receive signals only from one kind of molecule specified by its cyclotron frequency spectrum.

1. If the flux tubes carry monopole flux (this is possible in TGD framework and requires the the flux tube cross section is closed 2-surface), stabilization of the flux tube thickness stabilizes the magnetic field strength. How the stabilization of the thickness of the flux tubes could have been achieved?
   

   Pollack's negatively charged EZs with dark protons at magnetic flux tubes giving rise to dark nuclei identifiable as dark proton sequences suggests an answer. Maybe the presence of dark proton sequences could stabilize the flux tube thickness. Dark proton sequences have also interpretation as dark DNA/RNA/amino-acid sequences (see this).
   
   

A further question is whether the magnetic body of the prebiotic cell identified as EZ could use the information about invader molecule to represent its magnetic body either concretely and perhaps even symbolically and regenerate the concrete representation when needed.

1. The concrete representation could be in terms of dark proteins whose folding would represent the topology of the invader molecule and symbolic representation in terms of dark DNA transcribed to dark protein. If the dark protein has same topology of knotting it could more easily attach to the invader molecule and make it harmless. Note that the invaders are naturally other dark DNAs and proteins jus as in living matter. The higher purpose behind this cold war would be stimulation of mimicry - emulation in computer science - leading to generation of cognitive representations and negentropic entanglement.
   
   
2. Not only the representation of the 3-D magnetic body - its behavior - is possible. In ZEO also the representation of the dynamical evolution of magnetic body becomes possible since basic objects are pairs of 3-surfaces at future and past boundaries of causal diamond. The challenge is to represent the topology time development of magnetic body - 2-braiding, first concretely by mimicking it and then symbolically in terms of DNA coding for proteins doing the mimicry. The obvious representation for the behavior of magnetic body of invader molecule would be in terms of folding and unfolding of protein representing it.
   
   
3. The question how the symbolic representation could have emerged leads to a vision about how genetic code emerged. The model for living system as topological quantum computer utilizing 2-braiding for string world sheets at 4-D space-time leads to the idea that 3-D coordinate grids formed by flux tubes are central for TQC: each node of grid is characterized by 6 bits telling about the topology of the node concerning 2-braiding. Could the 6 bits of dark DNA code for the local topology of the invader molecule and an the flux tube complex mimicking it?
   
   
4. This raises the possibility that DNA strands - one for each coordinate line in say z-direction could code for the 2-braiding of 3-D coordinate grid and in this manner code for the magnetic template of invader molecule and also that of the biological body. Therefore genetic code would code for both the basic building bricks of the biological body and 4-D magnetic body serving as template for the development of biological body.
   
   

One can imagine how the biochemical evolution after this stage might have taken place.

1. At the next step the chemical representation of genetic code would have emerged. Dark proteins learned to attach to real proteins and real proteins to other proteins and DNA and bio-catalysis became possible.
   
   
2. The transformation of the ordinary photons emitted in the transitions of biomolecules to dark photons made possible the recognition of invader molecules using ordinary photons emitted in their molecular transitions.
   
   
3. Magnetic bodies learned to control biochemical reactions by using dark cyclotron radiation transformed to bio-photons.
   
   
4. Gradually dark and ordinary proteins developed a rich repertoire of functions relying on reconnection, communication by dark photons, and attachment in invader molecule. Proteins began to serve as building bricks, as bio-catalysts, promote the replication of DNA, responding to stimuli, serve as receptors.
   
   

Possible mechanism of water memory and homeopathy

The general vision about prebiotic evolution described above suggests that the mechanisms of water memory and homeopathy are basically the same as those underlying the workings of the immune system.

1. Exclusion zones could define primordial life forms with genetic code. They are able to detect the presence of invader molecule from its cyclotron frequency spectrum.
   
   
2. Dark proteins can form concrete memory representations of the invader
   molecules in terms of dark proton sequences defining dark proteins. The folding of these dark proteins mimics the behavior of the magnetic bodies of the invaders. These dark proteins can attach to the magnetic body of the invader molecule to make it non-dangerous. Even symbolic representations in terms of dark DNA allowing transcription and translation to concrete dark protein representation could be involved. The procedure involved in the manufacture of homeopathic remedy could be seen as a series of "environmental catastrophes" driving the evolution of dark primordial life by feeding in metabolic energy and generating new EZs, which mimic the invader molecules and existing EZs mimicking them.
   
   
3. In organism the dark DNA representing the invader molecule would generate ordinary genes coding for ordinary proteins attaching to the invader molecules by the attachment of ordinary DNA nucleotides to them. The attachment would involve h_eff reducing phase transition reducing the length of connecting flux tube.
   
   
4. Later dark genetic code transformed to chemical genetic code as dark DNA strands were formed around dark double strands and large number of other biological functions emerged besides immune response.
   
   
5. The mechanical agitation in the manufacturing of homeopathic remedy generates exclusion zones and new primitive life forms by providing the needed energy. These in turn recognize and memorize invader molecules and their already existing representations as EZs.
   
   

For details see the article TGD view about homeopathy, water memory, and evolution of immune system.

Could vacuum expectation value of Higgs have TGD counterpart?

Although it seems that Higgs mechanism is replaced by p-adic thermodynamics in TGD framework, one can ask whether the analog of Higgs vacuum expectation somehow emerges. This is expected to be the case if one believes that QFT theory limit for TGD makes sense (for CMAP representations about TGD see this).

1. TGD allows Higgs like particles and it would be very difficult to develop a convincing arguments for their non-existence. The model for elementary particles as string like objects consisting of "ur-fermions" with electro-weak quantum numbers of electron and quark allows also scalar particles.
   
   
2. The notion of Higgs vacuum expectation as fundamental mechanism of particle massivation is not supported by the following argument.
   
   
   
   1. Higgs would naturally correspond to CP₂ vector field most naturally in complex coordinates for CP₂ behaving like electroweak doublet.
      
      
   2. This field should be covariantly constant but CP₂ does not allow covariantly constant vector fields. This could conform with the view that p-adic thermodynamics describes particle massivation.
      
      
3. One can consider a loophole to this argument. Could it happen that Higgs field is covariantly constant only with respect to the induced spinor connection? For instance, at the string world sheets associated with fermions or at the orbits of string ends? Or is there some other way for Higgs vacuum expectation to creep in.
   

Quite recent little progress in the understanding of Kähler-Dirac equation this) suggests that the analog of Higgs vacuum expectation might make sense and could code for masses of the particles in space-time geometry, maybe in the geometry of space-time sheets at which particle is topologically condensed. Particle masses would follow from p-adic thermodynamics (see this and this).

1. The Kähler-Dirac action for the modes of induced imbedding space spinor field reduces to a vanishing contribution in the interior of space-time surface and by weak form of electric magnetic duality (WFEMD) to a boundary term given by Chern-Simons action.
   
   
2. For the light-like partonic orbits associated with wormhole contacts these terms must vanish by conservation of fermionic charges and one obtains just algebraic form of M⁴ Dirac action at the partonic 2-surface so that massless fermionic propagators are obtained. There is nothing Higgs like in propagators and this conforms nicely with the stringy version of twistor Grassmannian approach which applies in TGD.
   
   
3. At the space-like 3-surfaces defining the ends of space-time at boundaries of CDs one obtains algebraic massless Dirac plus Chern-Simons term.
   
   
4. Could this term play the the role of Higgs vacuum expectation? Does this term give only a small additional contribution to the masses of particles besides that given by p-adic thermodynamics for wormhole contacts and for string like object in electro-weak or even Compton length scale?
   
   
5. What happens at at the ends of string worlds sheets. Here the Higgs term would correspond to the normal (time-like) component of the Kähler-Dirac gamma matrix whose CP₂ part would give needed non-tachyonic contribution to mass. One would get algebraic form of M⁴ Dirac equation: p^kγ_k Ψ= ΓⁿΨ, where Γ^α=T^αkγ_k is modified gamma matrix defined as a contraction of the canonical momentum currents for Kähler action with imbedding space gamma matrices γ_k. Note that this Kähler-Dirac gamma matrix could be covariantly constant along the boundary of string world sheet and perhaps even inside string world sheet.
   
   
6. Note that Minkowskian part of Γⁿ would give a tachyonic contribution, which might relate to the still poorly understood question how the tachyonic ground states of super-conformal representations with half
   integer conformal weight emerge.
   
   

Although it seems that Higgs mechanism is replaced by p-adic thermodynamics in TGD framework, one can ask whether the analog of Higgs vacuum expectation somehow emerges. This is expected to be the case if one believes that QFT theory limit for TGD makes sense.

1. TGD allows Higgs like particles and it would be very difficult to develop a convincing arguments for their non-existence. The model for elementary particles as string like objects consisting of "ur-fermions" with electro-weak quantum numbers of electron and quark allows also
   scalar particles.
   
   
2. The notion of Higgs vacuum expectation as fundamental mechanism of particle massivation is not supported by the following argument.
   
   
   1. Higgs would naturally correspond to CP₂ vector field most naturally in complex coordinates for CP₂ behaving like electroweak doublet.
      
      
   2. This field should be covariantly constant but CP₂ does not allow covariantly constant vector fields. This could conform with the view that p-adic thermodynamics describes particle massivation.
      
      
3. One can consider a loophole to this argument. Could it happen that Higgs field is covariantly constant only with respect to the induced spinor connection? For instance, at the string world sheets
   associated with fermions or at the orbits of string ends? Or is there some other way for Higgs vacuum expectation to creep in.
   

Quite recent little progress in the understanding of Kähler-Dirac equation suggests that the analog of Higgs vacuum expectation might make sense and could code for masses of the particles in space-time geometry, maybe in the geometry of space-time sheets at which particle is topologically condensed. Particle mass itself would follow from p-adic thermodynamics.

1. The Kähler-Dirac action for the modes of induced imbedding space spinor field reduces to a vanishing contribution in the interior of space-time surface and by weak form of electric magnetic duality (WFEMD) to a boundary term given by Chern-Simons action.
   
   
2. For the light-like partonic orbits associated with wormhole contacts these terms must vanish by conservation of fermionic charges and one obtains just algebraic form of M⁴ Dirac action at the partonic 2-surface so that massless fermionic propagators are obtained. There is nothing Higgs like in propagators.
   
   
3. At the space-like 3-surfaces defining the ends of space-time at boundaries of CDs one obtains algebraic massless Dirac plus Chern-Simons term.
   
   
4. Could this term play the the role of Higgs vacuum expectation? Does this term give only a small additional contribution to the masses of particles besides that given by p-adic thermodynamics for wormhole contacts and for string like object in electro-weak or even Compton
   length scale?
   
   
5. What happens at at the ends of string worlds sheets. Here the Higgs term would correspond to the normal (time-like) component of the Kähler-Dirac gamma matrix whose CP₂ part would give needed non-tachyonic contribution to mass. One would get algebraic form of M⁴ Dirac equation: p^kγ_k Ψ= ΓⁿΨ, where Γ^α=T^{α k}γ_k is modified (Kähler-Dirac) gamma matrix defined as a contraction of the canonical momentum currents for Kähler action with imbedding space gamma matrices γ_k. Note that this Kähler-Dirac gamma matrix could be covariantly constant along the boundary of string world sheet and perhaps even inside string world sheet.
   
   
6. Note that Minkowskian part of Γⁿ would give a tachyonic contribution,
   which might relate to the still poorly understood question how the tachyonic ground states of super-conformal representations with half integer conformal weight emerge.
   
   

W boson excess at LHC and ATLAS: explanations?

Tommaso Dorigo told about diboson excess (W boson pairs) reported both by ATLAS and CMS in 7 - and 8-TeV collision data. ATLAS measure the cross section to be 71.4+/- 7.5 pb, which is higher than the theory prediction 57.3 pb. Two sigma excess is the technical term. 2 sigma is not convincing but both ATLAS and CMS have measured the excess forces to consider the situation more seriously.

A rather simple SUSY model has been proposed to explain the deviations and the mathematical measure allowing to compare explanations favors SUSY model over standard model. The model involves stop as the lightest squark, neutralino and chargino and bino as spartners of weak bosons. Bino is assumed to be the lightest supersymmetric particle. W pairs are produced in a decay chain initiated by the production of stop pair. Stop then decays to b quark and chargino and chargino to neutralino plus W boson. Same happens for antistop so that one obtains W pair. The model has as parameters M(stop) and M(neutralino). The model produces the values M(stop)= 200 GeV for stop mass and M(neu)=150 GeV for neutralino mass, which are not in already excluded region of the parameter space. Also the production of neutralino pairs is predicted and might serve as a test for the model.

This is certainly not the only model that one can imagine. Especially so in TGD framework which predicts a lot of new physics about which part might be already visible.

1. M₈₉ hadron physics (see this) could explain the findings about heavy ion and proton heavy ion collisions at RHIC and LHC in terms of mesonlike states of M₈₉ - string like objects for low energy M₈₉ hadron physics - decaying to ordinary hadrons.
   
   
2. TGD predicts a version of SUSY based with covariantly constat right-handed neutrinos generating the SUSY is consistent with the separate conservation of B and L (see this and also this). p-Adic thermodynamics provides an elegant mechanism predicting the masses of spartners: the mass formula is the same as for partners but p-adic length scale can be different. Unfortunately it is not possible to predict the p-adic length scale associated with the right-handed neutrino.
   
   
3. TGD predicts also higher generations of gauge bosons, which could form effectively SU(3) octet whereas fermion generations would effectively form SU(3) triplets (see this).
   

The decays of the new particles predicted by these scenarios could generate excess of W bosons. W bosons are favored over Z bosons for any production mechanism involving a decay chain of pair of new particles producing quark pairs whose members, which are U or D type quarks, decay to lighter D or U type quarks by the emission of W boson. That decay to lighter quarks can involve W boson emission but no Z emission is due to the basic properties of CKM mixing.

Pythagoras, music, sacred geometry, and genetic code

The idea that the 12-note scale could allow mapping to a closed path covering all vertices of icosahedron having 12 vertices and not intersecting itself is attractive. Also the idea that the triangles defining the faces of the icosahedron could have interpretation as 3-chords defining the notion of harmony for a given chord deserves study. The paths in question are known as Hamiltonian cycles and there are 1024 of them. There paths can be classified topologically by the numbers of triangles containing 0, 1, or 2 edges belonging to the cycle representing the scale. Each topology corresponds to a particular notion of harmony and there are several topological equivalence classes.

The idea that the 12-note scale could allow mapping to a closed path covering all vertices of icosahedron having 12 vertices and not intersecting itself is attractive. Also the idea that the triangles defining the faces of the icosahedron could have interpretation as 3-chords defining the notion of harmony for a given chord deserves study. The paths in question are known as Hamiltonian cycles and there are 1024 of them. There paths can be classified topologically by the numbers of triangles containing 0, 1, or 2 edges belonging to the cycle representing the scale. Each topology corresponds to a particular notion of harmony and there are several topological equivalence classes.

The vision about DNA and amino-acids as analogs of notes and music piece produced by the translation machinery from mRNA is also attractive and induce the idea that the 20 amino-acids could somehow correspond to the 20 triangles of icosahedron. The combination of this idea with the idea of mapping 12-tone scale to a Hamiltonian cycle at icosahedron leads to the question whether amino-acids could be assigned with a topological equivalence class of Hamiltonian cycle and whether topological characteristics could correspond to physical properties of amino-acids. It turns out that the identification of 3 basic polar amino-acids with triangles containing no edges of the scale path, 7 polar and acidic polar amino-acids with those containing 2 edges of the scale path, and 10 non-polar amino-acids with triangles containing 1 edge on the scale path would be consistent with the constraints on the Hamiltonian cycles. One could of course criticize the lumping of acidic polar and polar aminoacids to same group.

The number of DNAs coding for a given amino-acid could be also seen as such a physical property. The model for dark nucleons leads to the vertebrate genetic code with correct numbers of DNAs coding for amino-acids. It is however far from clear how to interpreted DNAs geometrically and the problem whether one cold understand genetic code geometrically remains open.

For details see the chapter Quantum model for hearing of "TGD and EEG" or the article Pythagoras, music, sacred geometry, and genetic code.

More precise view about high Tc superconductivity taking into account recent experimental results

I have developed the model of high T_c superconductivity during last twenty years (see this). This model is especially relevant in TGD inspired quantum biology where high T_c superconductiviy is proposed to be in a key role. The basic new concepts are magnetic body and the identification of dark matter as phases with effective Planck constant h_eff=n× h.

There are more recent results allowing to formulate more precisely the idea about transition to high T_c super-conductivity as a percolation type phenomenon. Let us first summarize very briefly the relevant aspects about about high T_c superconductors.

1. 2-dimensional phenomenon is in question. Supra current flows along preferred lattice planes and type II super-conductivity in question. Proper sizes of Cooper pairs (coherence lengths) are ξ =1-3 nm. Magnetic length λ is longer than ξ/2^1/2.
   
   
2. Mechanism for the formation of Cooper pairs is the same water bed effect as in the case of ordinary superconductivity. Phonons are only replaced with spin-density waves for electrons with periodicity in general not that of the underlying lattice. Spin density waves relate closely to the underlying antiferro-magnetic order. Spin density waves appear near phase transition to antiferromagnetism.
   
   
3. The relative orbital angular mentum of Cooper pair is L=2 (x²-y² wave), and vanishes at origin unlike for ordinary s wave SCs. The spin of the Cooper pair vanishes.

Consider now the translation of this picture to TGD language. Basic notions are following.

1. Magnetic flux tubes and possibly also dark electrons forming Cooper pairs.
   
   
2. The appearence of spin waves means sequences of electrons with opposite spins. The magnetic field associated with them can form closed flux tube containing both spins. Assume that spins-are orthogonal to the lattice plane in which supracurrent flows. Assume that the flux tube branches associated with electron with given spin branches so that it is shared with both neighboring electrons.
   
   
3. Electrons of opposite spins at the two portions of the closed flux tube have magnetic interaction energy. The total energy is minimal when the spins are in opposite directions. Thus the closed flux tube tends to favor formation of Cooper pairs.
   
   
4. Since magnetic interaction energy is proportional to h_eff=n× h, it is expected stabilize the Cooper pairs at high temperatures. For ordinary super-conductivity magnetic fields tends to de-stabilize the pairs by trying to force the spins of spin singlet pair to the same direction.
   
   
5. This does not yet give super-conductivity. The closed flux tubes associated with paired spins can however reconnect so that longer flux closed flux tubes are formed. If this occurs for entire sequences, one obtains two flux tubes containing electrons with opposite spins forming Cooper pairs: this would be the "highway" and the proposed percolation would correspond to this process. The pairs would form supracurrents in longer scales.
   
   
6. The phase phase transitions generating the reconnections could be percolation type phase transition.
   
   

This picture might apply also in TGD based model of bio-superconductivity.

1. The stability of dark Cooper pairs assume to reside at magnetic flux tubes is a problem also now. Fermi statistics favors opposite spins but this means that magnetic field tends to spit the pairs if the members of the pair are at the same flux tube.
   
   
2. If the members of the pair are at different flux tubes, the situation changes. One can have L=1 and S=1 with parallel spins (ferromagnetism like situation fluxes in same direction) or L=2 and S=0 state (anti-ferromagnetism like situation with opposite fluxes). L>0 is necessary since electrons must reside at separate flux tubes.
   
   
3. Note that the phase transition liberates energy if Cooper pairs remain at rest. The energy liberated would be rather large if the value of h_eff is so large that EEG photon energies are in the range of biophoton energies. The binding energy of Cooper pairs would be in eV range too as aksoi the interaction energy of spin 1 Cooper pairs in the magnetic field. Also spontaneous magnetization of the magnetic body with a liberation of large energy can be considered and the claimed spontaneous acceleration of rotating magnetic systems could rely on this mechanism. Even ATP synthase acting as motor could get its angular momentum and rotational energy via this kind of process. The rotation of the magnetic system could also drive charged particles to the magnetic body by centrifugal acceleration.
   
   

To conclude, the notions of magnetic flux tube and dark matter in TGD sense allow to understand high T_c superconductivity.

SN 1987A and many-sheeted space-time

Lubos has written a highly rhetoric, polemic, and adrenaline rich comments posting about the mediabuzz related to supernova SN 1987 A. The target of Lubos is the explanation proposed by James Franson from the University of Maryland for the findings discussed in Physics Archive Blog.I do not have any strong attitude to Franson's explanation but the buzz is about very real thing: unfortunately Lubos tends to forget the facts in his extreme orthodoxy.

What happened was following. Two separate neutrino bursts arrived from SN1987 A. At 7.35 AM Kamionakande detected 11 antineutrons, IMB 8 antineutrinos, and Baksan 5 antineutrinos. Approximately 3 hours later Mont Blanc liquid scintillator detected 5 antineutrinos. Optical signal came 4.7 hours later.

The are several very real problems as one can get convinced by going to Wikipedia:

1. If neutrinos and photons are emitted simultaneously and propagate with the same speed, they should arrive simultaneously. I am notspecialist enough to try to explain this difference in terms of standard astrophysics. Franson however sees this difference as something not easy to explain and tries to explain it in his own model.
   
   
2. There are two neutrino bursts rather than one. A modification of the model of supernova explosion allowing two bursts of neutrinos would be needed but this would suggest also two photon bursts.
   

These problems have been put under the carpet. Those who are labelled as crackpots often are much more aware about real problems than the academic career builders.

In TGD framework the explanation would be in terms of many-sheeted space-time. In GRT limit of TGD the sheets of the many-sheeted space-time time are lumped to single sheet: Minkowski space with effective metric defined by the sum of Minkowski metric and deviations of the metrics of the various sheets from Minkowski metric. The same recipe gives effective gauge potentials in terms of induced gauge potentials.

Different arrival times for neutrinos and photons would be however a direct signature of the many-sheeted space-time since the propagation velocity along space-time sheets depends on the induced metric. The larger the deviation from the flat metric is, the slower the propagation velocity and thus longer the arrival time is. Two neutrino bursts would have explanation as arrivals along two different space-time sheets. Different velocity for photons and neutrinos could be explained if they arrive along different space-time sheets. I proposed for more than two decades ago this mechanism as an explanation for the finding of cosmologists that there are two different Hubble constants: they would correspond to different space-time sheets.

The distance of SN1987A is 168,000 light years. This means that the difference between velocities is Δ c/c ≈ Δ T/T≈ 3 hours/168 × 10³≈ 2× 10^-9. The long distance is what makes the effect visible.

I proposed earlier sub-manifold gravity as an explanation for the claimed super-luminality of the neutrinos coming to Gran Sasso from CERN and mentioned in this context also SN1987A but did not compare the deviations from the light velocity. In this case the effect would have been Δ c/c≈ 2.5× 10^-5 and thus four orders of magnitude larger than four supernova neutrinos. It however turned out that the effect was not real.

For details see the chapter TGD and potential anomalies of GRT of "Physics in many-sheeted space-time".

Quantum gravity, dark matter, and prebiotic evolution

I have been updating last 9 months the books about TGD and TGD inspired quantum theories of biology and consciousness. The process has been extremely fruitful since it has allowed to gain bird's eye of view and gain insights about connections between various ideas forced by considerations based on elegance and mathematical beauty.

I added a new chapter Quantum gravity, dark matter, andnd prebiotic evolution to "Genes and Memes" discussing the recent vision about prebiotic life in TGD Universe combinig several quite recent steps of prograss related to the understand of the hierarchy of Planck constants defining dark matter hierarchy. I add below the introduction of this chapter.

---

The ideas related to prebiotic evolution have developed rather rapidly after the discovery of the hierarchy of Planck constants around 2003 providing a general manner to understand living organisms as macroscopic quantum systems.

1. Magnetic body as carrier of dark matter realized as phases with non-standard value h_eff=n× h of Planck constant is the key concept in the developments and brings to the description of the living matter a third level besides organism and environment.
   
   
2. EEG and its predicted fractal variants have interpretation in terms of communication from biological body to to magnetic body and as control of biological body by magnetic body (see this). EEG photons are identified as dark photons and the energy spectrum of dark EEG photons is conjectured to correspond to that for bio-photons. Bio-photons would result in the transformation of dark photons to ordinary ones and their energy spectrum would directly reflect the spectrum of endogenous magnetic fields. If h_eff for given ion is proportional to its mass number, the spectrum of energies for bio-photons resulting from dark cyclotron photons is universal and does not depend on charged particle.
   
   
3. One can now understand the mechanism making Cooper pairs of bio-superconductors stable, possibly even above room temperatures. Also the understanding of cell membrane as Josephson junction has increased considerably. The recent view is that generalized Josephson junction is in question. The Josephson energy identified as the Coulombic energy difference at two sides of the membrane is generalized by including also the difference of cyclotron energies. This contribution dominates, and this explains why the value of metabolic energy currency is roughly 5-10 times higher than the value of Josephson energy.
   

   One ends up with a model of transmembrane proteins as generalized Josephson junctions by taking a "square root" of the thermodynamical model meaning that Boltzman weights are replaced with their complex square roots. The chemical potential difference of thermodynamical model is replaced with the difference of cyclotron energies. Generalized Josephson energies correspond to the differences of cyclotron energies in the first approximation since Coulombic contribution is small. The communications to the magnetic body by dark photons rely on frequency modulation due to variations of membrane voltage, in particular those induce by nerve pulses.
   
   

4. The totally unexpected observation was that the states of dark protons forming dark nuclei as string like objects correspond in natural manner to DNA,RNA, aminoacids and even tRNA molecules and that vertebrate genetic code is realized naturally, led to the proposal that prebiotic life relies on dark nuclear physics (see this).
   
   
5. Taking seriously the findings related to water memory and homeopathy as well as the findings of Gariaev et al has led to a further progress. In this framework water memory and homeopathy provide direct evidence for the role of dark proton sequences at magnetic flux tubes as prebiotic life forms. The preparation of the homeopathic remedy would induce evolutionary process leading to a generation of a population of regions of water mimicking the magnetic body of the invader molecule. The challenge is to identify these regions.
   
   
6. The understanding of negentropic entanglement as entanglement described by n× n unit matrix and by unitary matrix for entanglement coefficient allowed a more precise understanding of Negentropy Maximization Principle and led to the conjecture that n is nothing but the integer characterizing h_eff. NMP implies that Universe generates negentropic entanglement, "Akashic records", being analogous to huge library extending quantum jump by quantum jump. It is perhaps not an accident that in quantum computation entanglement matrix is unitary.
   
   
7. There was also another thread related to the ideas about hierarchy of Planck constants. The findings of Nottale suggest that planets correspond to Bohr orbits with gigantic gravitational Planck constant. It took quite a time to realize that the same predictions follow if h_gr is associated with pairs formed by microscopic systems and Sun and that in this case the values of h_gr could be identified with those of h_eff.
   

   Already during first years emerged the idea that the Planck constant characterizes magnetic flux tubes connecting two systems and depends on the quantum numbers of the systems assignable to the interactions in question. Therefore one can speak also about h_em assignable to electromagnetic interactions. A vision developed stating that when interaction gets too strong, h_eff increases so that the perturbation series in powers of 1/h_eff converges and perturbation theory works. At space-time level this means non-determinism, which is key feature of the basic variational principle: the space-time sheets connecting initial and final 3-surface at boundaries of CD are n-sheeted for h_eff=n× h and the sheets co-incide at ends.
   
   

8. The findings of Pollack about exclusion zones and fourth phase of water meant a further breakthrough (see this) and led to the proposal that negatively charged exclusion zones (EZs) of water with H_1.5O stoichiometry are accompanied by magnetic body carrying dark proton nuclei at the flux tubes. EZs are excellent candidates for primitive life forms and can be identified as the primitive life forms making possible water memory and homeopathy.
   
   
9. The last step of progress relates to the proposal of Tajmar et al that gravimagnetic effect could explain the well-established anomaly relating to the measurement of the mass of Cooper pair in rotating super- conductor. The GRT prediction for the effect is however 28 orders of magnitude too small so that new physics would be needed. The Thomson gravimagnetic field is proportional to h² so that large value of Planck constant could explain the effect. The value can be estimated and it is of the order of 10¹⁴ as required! If it is equal to h_eff then the energy spectrum of dark EEG photons is that of bio-photons as conjectured earlier!
   
   

The following sections describe in detail the outcome of this progress.

1. In the first section gravimagnetic effect and its biological implications are discussed from TGD point of view.
   
   
2. In the second section the model for water memory and homeopathy is discussed and shown to lead to a general model for how immune system and bio-catalysis could have developed from their primordial versions,how dark proteins might have emerged as concrete representations for invader molecules making it possible to make the invader non-dangerous by attaching to its magnetic body, how DNA and genetic code could have emerged as symbolic representations for the magnetic bodies of invader molecules and later as symbolic representation of the magnetic body of the system itself. Zero Energy Ontology implies that actually time evolution of the magnetic body can be coded by DNA and protein folding could provide a concrete representation for this time evolution.
   
   

For details and background see the new chapter Quantum gravity, dark matter, and prebiotic evolution of "Genes and Memes".

Gravitational Mother Gaia and life

In an earlier posting I have told about considerable progress in understanding TGD inspired quantum biology. The basic result is that the gravitatational Planck constant h_gr inspired by Nottale's observations and h_eff inspired by the effects of ELF radiation on vertebrate brain can be one and same thing at least in elementary particle scales where h_gr is defined for a pair formed by elementary particle (say) and Earth, or Sun or some massive body. It is of course possible that heavier objects than elementary particle can appear as second member in the pair. The objects are connected by gravitational flux tubes mediating gravitational interaction.

The big surprise was that h_gr is indeed of same order of magnitude as needed for the energies of EEG photons to be in visible-UV range so that their decay products can be interpreted as biophotons. Dark cyclotron photons with universal energy spectrum in this range would control bio-chemical reactions by resonance mechanism in living matter.

This picture generalizes to other interaction and the notion of h_em= Z₁Z₂e²/v₀. Now the surprising numerical accident is that for ATP synthase which is motor with rotating shaft rotating with velocity v₀ and generating three ATPs from ADP during single turn h_em seems is same order of magnitude as h_gr(particle,Earth) for elementary particles.

These findings lead to fascinating speculations about the role of quantum gravitation in living systems.

Negentropic entanglement (NE) is one of the key notions of TGD inspired quantum biology. For instance, it would seem that NE would look more natural metabolic resource than energy. Nutrients should carry it. NE is however not single particle property but between nutrient and some other system in the recent case. What can one say about this system? Can it be part of nutrient? Could it correspond to oxygen molecules? Or could it be gravittional Mother Gaia identified in some sensible manner?

If one believes on the presence of gravimagnetic flux tubes and their role as generator of macroscopic quantum coherence in biology then one is forced to consider seriously also NE between its ends. If this is the case then the view of religions about life might be nearer to truth than that of hard-born materialists.

To make this more concrete, let us first look what the transfer of NE could mean.

1. Suppose that nutrient N has NE with unknown system A which a priori could be part of nutrient. Assume that the transfer of NE of nutrient with A is formed by reconnection of U-shaped flux tubes associated with N (or glucose G produced from it) and A so that two parallel flux tubes connecting N and A are formed.
   
   
2. The basic operation allowing transformation of N-A NE to P-A NE is following. The two flux tube portions of U-shaped flux associated with the receiver R are reconnected with the two parallel flux tubes connecting N and A so that two flux tubes connecting R to A are formed. NMP strongly suggests that the entanglement remains negentropic in the process.
   
   
3. NE is first transferred to P using this process so that P and A are now NE-connected. After this P attaches to ADP to yield ATP and ATP attaches to B and the transfer process leads to NE between B and A.
   

   For ATP synthase the h_em consisting two elementary charges is of the same order as h_gr. This is probably not an accident. Could this mean that this kind of flux tube can reconnect with gravitational flux tube? Could this make possible a reconnection transforming N-Earth NE to P-Earth NE? This looks plausible.
   
   

Consider now the identification of A.

1. If one assumes that the negentropic entanglement corresponds to gravitational flux tubes for N-Earth system then A should be gravitational Mother Gaia, whatever its precise definition might be. N (and glucose) molecules would be alive in the sense that they have
   NE with Mother Gaia.
   
   
2. Could oxygen have some deeper role? For instance, could O₂ molecules serve as analogs of cell membrane receptors for Mother Gaia meaning that gravitational flux tubes go through O₂ molecules? This does not look plausible since metabolism is possible also as fermentation involving no oxygen.
   
   
3. In this picture the role of breathing and fermentation would be to make possible the transfer of NE from nutrients to the living system.
   
   

This picture allows to imagine about what might happen in biological death. Biological death takes first place only at the highest level of self hierarchy assignable to the our biological body. Cells continue for some time their life even after the last breath. The notion of h_gr together with Equivalence Principle suggests that the living biological body has negentropic flux tube connections to both electromagnetic magnetic body (personal magnetic body) and to gravitational Mother Gaia (MG) (especially during sleep) representing collective consciousness in the scale of Earth. Also connections to higher levels are possible. Also personal magnetic body and MG have connections. At the moment of biological death the negentropic flux tube pairs connecting the personal magnetic body to biological body are split and only those with MG remain or are generated in this process. This would happen later at lower levels of biological self hierarchy such as organ and organelles and eventually for cells and biopolymers. The magnetic bodies of the resulting decay products have negentropic entanglement with MG and and can be used as nutrients to transfer this entanglement to bio-molecules.

The quantum model for metabolism allows to understand life as a process in which negentropic entanglement of gravitational Mother Gaia with nutrients is transformed to that of molecules of biological body with personal magnetic body and further processed and enriched. At the moment of biological death this information returns to the personal magnetic body which now connects only gravitational Mother Gaia or higher levels in the hierarchy. By NMP information is not lost but increases steadily giving rise to "Akashic records". This view conforms with the core ideas of spiritual and religious teachings.

For the details the reader can consult the article Implications of strong gravimagnetism for TGD inspired quantum biology.

String world sheets, partonic 2-surfaces and vanishing of induced (classical) weak fields

Well-definedness of the em charge is the fundamental on spinor modes. Physical intuition suggests that also classical Z⁰ field should vanish - at least in scales longer than weak scale. Above the condition guaranteeing vanishing of em charge has been discussed at very general level. It has however turned out that one can understand situation by simply posing the simplest condition that one can imagine: the vanishing of classical W and possibly also Z⁰ fields inducing mixing of different charge states.

1. Induced W fields mean that the modes of Kähler-Dirac equation do not in general have well-defined em charge. The problem disappears if the induced W gauge fields vanish. This does not yet guarantee that couplings to classical gauge fields are physical in long scales. Also classical Z⁰ field should vanish so that the couplings would be purely vectorial. Vectoriality might be true in long enough scales only. If W and Z⁰ fields vanish in all scales then electroweak forces are due to the exchanges of corresponding gauge bosons described as string like objects in TGD and represent non-trivial space-time geometry and topology at microscopic scale.
   
   
2. The conditions solve also another long-standing interpretational problem. Color rotations induce rotations in electroweak-holonomy group so that the vanishing of all induced weak fields also guarantees that color rotations do not spoil the property of spinor modes to be eigenstates of em charge.
   

One can study the conditions quite concretely by using the formulas for the components of spinor curvature .

1. The representation of the covariantly constant curvature tensor is given by
   
   

   
   R₀₁= e⁰ ∧ e¹-e²∧ e³ , R₂₃= e⁰∧ e¹- e²∧ e³ ,
   

   R₀₂=e⁰∧ e²-e³ ∧ e¹ , R₃₁ = -e⁰∧
   e²+e³∧ e¹ ,
   

   R₀₃ = 4e⁰∧ e³+2e¹∧ e²
   , R_{12 = 2e⁰∧ e³+4e¹∧ e² .}
   

   R₀₁=R₂₃ and R₀₃= R₃₁ combine to form purely left handed classical W boson fields and Z⁰ field corresponds to Z⁰=2R₀₃.
   

   Kähler form is given by
   

   J= 2(e⁰∧e³+e¹∧ e²) .
   
   

2. The vanishing of classical weak fields is guaranteed by the conditions
   

   e⁰∧ e¹-e²∧e³ =0 ,
   

   e⁰∧ e²-e³ ∧e¹ ,
   

   4e⁰∧ e³+2e¹∧e² .
   
   

3. There are many manners to satisfy these conditions. For instance, the condition e¹= a× e⁰ and e²=-a×e³ with arbitrary a which can depend on position guarantees the vanishing of classical W fields. The CP₂ projection of the tangent space of the region carrying the spinor mode must be 2-D.
   

   Also classical Z⁰ vanishes if a²= 2 holds true. This guarantees that the couplings of induced gauge potential are purely vectorial. One can consider other alternaties. For instance, one could require that only classical Z⁰ field or induced Kähler form is non-vanishing and deduce similar condition.
   
   

4. The vanishing of the weak part of induced gauge field implies that the CP₂ projection of the region carrying spinor mode is 2-D. Therefore the condition that the modes of induced spinor field are restricted to 2-surfaces carrying no weak fields sheets guarantees well-definedness of em charge and vanishing of classical weak couplings. This condition does not imply string world sheets in the general case since the CP₂ projection of the space-time sheet can be 2-D.
   
   

How string world sheets could emerge?

1. Additional consistency condition to neutrality of string world sheets is that Kähler-Dirac gamma matrices have no components orthogonal to the 2-surface in question. Hence various fermionic would flow along string world sheet.
   
   
2. If the Kähler-Dirac gamma matrices at string world sheet are expressible in terms of two non-vanishing gamma matrices parallel to string world sheet and sheet and thus define an integrable distribution of tangent vectors, this is achieved. What is important that modified gamma matrices can indeed span lower than 4-D space and often do so (massless extremals and vacuum extremals representative examples). Induced gamma matrices defined always 4-D space so that the restriction of the modes to string world sheets is not possible.
   
   
3. String models suggest that string world sheets are minimal surfaces of space-time surface or of imbedding space but it might not be necessary to pose this condition separately.
   
   

In the proposed scenario string world sheets emerge rather than being postulated from beginning.

1. The vanishing conditions for induced weak fields allow also 4-D spinor modes if they are true for entire spatime surface. This is true if the space-time surface has 2-D projection. One can expect that the space-time surface has foliation by string world sheets and the general solution of K-D equation is continuous superposition of the 2-D modes in this case and discrete one in the generic case.
   
   
2. If the CP₂ projection of space-time surface is homologically non-trivial geodesic sphere S², the field equations reduce to those in M⁴× S² since the second fundamental form for S² is vanishing. It is possible to have geodesic sphere for which induced gauge field has only em component?
   
   
3. If the CP₂ projection is complex manifold as it is for string like objects, the vanishing of weak fields might be also achieved.
   
   
4. Does the phase of cosmic strings assumed to dominate primordial cosmology correspond to this phase with no classical weak fields? During radiation dominated phase 4-D string like objects would transform to string world sheets.Kind of dimensional transmutation would occur.
   
   

Right-handed neutrino has exceptional role in K-D action.

1. Electroweak gauge potentials do not couple to ν_R at all. Therefore em neutrality condition is un-necessary if the induced gamma matrices do not mix right handed neutrino with left-handed one. This is guaranteed if M⁴ and CP₂ parts of Kähler-Dirac operator annihilate separately right-handed neutrino spinor mode. Also ν_R modes can be interpreted as continuous superpositions of 2-D modes and this allows to define overlap integrals for them and induced spinor fields needed to define WCW gamma matrices and super-generators.
   
   
2. For covariantly constant right-handed neutrino mode defining a generator of super-symmetries is certainly a solution of K-D. Whether more general solutions of K-D exist remains to be checked out.
   
   

See the chapter The recent vision about preferred extremals and solutions of the modified Dirac equation of "TGD: "Physics as infinite-dimensional geometry" or the article.

Further progress concerning the relationship between TGD and GRT and Kähler-Dirac action

The earlier attempts to understand the relationship between TGD and GRT have been in terms of solutions of Einstein's equations imbeddable to M⁴× CP₂ instead of introducing GRT space-time as a fictive notion naturally emerging from TGD as a simplified concept replacing many-sheeted space-time. This resolves also the worries related to Equivalence Principle. TGD can be seen as a "microscopic" theory behind TGD and the understanding of the microscopic elements becomes the main focus of theoretical and hopefully also experimental work some day.

The understanding of Kähler Dirac action has been second long term project. How can one guarantee that em charge is well-defined for the spinor modes when classical W fields are present? How to avoid large parity breaking effects due to classical Z⁰ fields? How to avoid the problems due to the fact that color rotations induced vielbein rotation of weak fields? The common answer to these questions is restriction of the modes of induced spinor field to 2-D string world sheets (and possibly also partonic 2-surfaces) such that the induced weak fields vanish. This makes string picture a part of TGD.

For details see the chapter TGD and GRT of "Physics in Many-Sheeted Space-time" or the article Further progress concerning the relationship between TGD and GRT and Kähler-Dirac action.

Implications of strong gravimagnetism for TGD inspired quantum biology

Physicists M. Tajmar and C. J. Matos and their collaborators working in ESA (European Satellite Agency) have made an amazing claim of having detected strong gravimagnetism with gravimagnetic field having a magnitude which is about 20 orders of magnitude higher than predicted by General Relativity.

Tajmar et al have proposed the gravimagnetic effect as an explanation of an anomaly related to the superconductors. The measured value of the mass of the Cooper pair is slightly larger than the sum of masses whereas theory predicts that it should be smaller. The explanation would be that actual Thomson field is larger than it should be because of gravimagnetic contribution to quantization rule used to deduce the value of Thomson field. The required value of gravimagnetic Thomson field is however 28 orders of magnitude larger than General Relativity suggests.

TGD inspired proposal is based on the notion of gravitational Planck constant assignable to the flux tubes connecting to massive objects. It turns out that the TGD estimate for the Thomson field has correct order of magnitude. The identification h_eff=h_gr at particle physics
and atomic length scales emerges naturally.

A vision about the fundamental role of quantum gravitation in living matter emerges. The earlier hypothesis that dark EEG photons decay to biophotons with energies in visible and ultraviolet range receives strong quantitative support. Also a mechanism for how magnetic bodies couple bio-chemistry emerges. The vision conforms with Penrose's intuitions about the role of quantum gravity in biology.

For the details the reader can consult the article Implications of strong gravimagnetism for TGD inspired quantum biology.